Information for motif20


Reverse Opposite:

p-value:1e-31
log p-value:-7.199e+01
Information Content per bp:1.795
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.7 +/- 55.0bp
Average Position of motif in Background69.5 +/- 76.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ATATAGCCTCCA-
-------ATCCAC

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATATAGCCTCCA
ATGGGATATATCCGCCT

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATATAGCCTCCA-----
AGGAGACCCCCAATTTG

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATATAGCCTCCA-----
NTNNCGTATCCAAGTNN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ATATAGCCTCCA
AAGATATCCTT--

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:ATATAGCCTCCA-----
-----GCCGCCATCTTG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ATATAGCCTCCA
--BCAGACWA--

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:ATATAGCCTCCA-----
TACGAGACTCCTCTAAC

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:ATATAGCCTCCA-----
ANNTNCCCACCCANNAC

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:ATATAGCCTCCA-----
CCTTCGGCGCCAAAAGG