| p-value: | 1e-28 |
| log p-value: | -6.601e+01 |
| Information Content per bp: | 1.587 |
| Number of Target Sequences with motif | 30.0 |
| Percentage of Target Sequences with motif | 0.14% |
| Number of Background Sequences with motif | 1.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 116.6 +/- 52.7bp |
| Average Position of motif in Background | 98.1 +/- 62.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0164.1_Nr2e3/Jaspar
| Match Rank: | 1 |
| Score: | 0.70
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CAAAGCTTTTAC
-CAAGCTT---- |
|
|
|
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 2 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CAAAGCTTTTAC
ACATCAAAGG------ |
|
|
|
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer
| Match Rank: | 3 |
| Score: | 0.56
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CAAAGCTTTTAC
-ACAGCTGTTV- |
|
|
|
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 4 |
| Score: | 0.55
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CAAAGCTTTTAC-------
--NNNATTTTACGACNNTN |
|
|
|
MA0442.1_SOX10/Jaspar
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAAAGCTTTTAC
ACAAAG------- |
|
|
|
PH0076.1_Hoxd11/Jaspar
| Match Rank: | 6 |
| Score: | 0.54
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CAAAGCTTTTAC-------
--ANNATTTTACGACNTNA |
|
|
|
TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | CAAAGCTTTTAC----
----CCTTTTATAGNC |
|
|
|
MA0514.1_Sox3/Jaspar
| Match Rank: | 8 |
| Score: | 0.52
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CAAAGCTTTTAC
AAAACAAAGG------ |
|
|
|
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 9 |
| Score: | 0.51
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CAAAGCTTTTAC-------
---ANATTTTACGAGNNNN |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 10 |
| Score: | 0.51
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CAAAGCTTTTAC
RACAAWGG------ |
|
|
|
