| p-value: | 1e-27 |
| log p-value: | -6.294e+01 |
| Information Content per bp: | 1.984 |
| Number of Target Sequences with motif | 29.0 |
| Percentage of Target Sequences with motif | 0.13% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 111.3 +/- 45.5bp |
| Average Position of motif in Background | 72.5 +/- 73.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0061.1_Sox11_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.86
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AACAAAGGAG--
ATAAGAACAAAGGACTA |
|
|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.85
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AACAAAGGAG--
AGAAGAACAAAGGACTA |
|
|
|
MA0143.3_Sox2/Jaspar
| Match Rank: | 3 |
| Score: | 0.84
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AACAAAGGAG
AACAAAGG-- |
|
|
|
MA0514.1_Sox3/Jaspar
| Match Rank: | 4 |
| Score: | 0.82
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGAG
AAAACAAAGG-- |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 5 |
| Score: | 0.80
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AACAAAGGAG
RACAAWGG-- |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 6 |
| Score: | 0.78
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -AACAAAGGAG
GAACAATGGN- |
|
|
|
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
| Match Rank: | 7 |
| Score: | 0.74
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGAG
RNAACAATGG-- |
|
|
|
MA0515.1_Sox6/Jaspar
| Match Rank: | 8 |
| Score: | 0.74
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGAG
AAAACAATGG-- |
|
|
|
PB0166.1_Sox12_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.73
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AACAAAGGAG-
AAACAGACAAAGGAAT |
|
|
|
MA0442.1_SOX10/Jaspar
| Match Rank: | 10 |
| Score: | 0.73
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | AACAAAGGAG
-ACAAAG--- |
|
|
|
