Information for motif36


Reverse Opposite:

p-value:1e-19
log p-value:-4.511e+01
Information Content per bp:1.954
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets97.1 +/- 55.8bp
Average Position of motif in Background124.9 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGCGC---
NNGCNCTGCGCGGC

MA0484.1_HNF4G/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCGC---
TGGACTTTGNNCTCN

MA0114.2_HNF4A/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGCGC--
CTGGACTTTGGACTC

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGCGC------
NNNNTTGGCGCCGANNN

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGCGC------
NNNNTTGGCGCCGANNN

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCGC----
TGGACTTTGNNCTNTG

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------CTTTGCGC
NNNNCAACCTTCGNGA

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCGC--
TGACCTTTGCCCTA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGCGC-
DTTTCCCGCC

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTTTGCGC--
TGACCTTTGCCCCA