Information for motif38


Reverse Opposite:

p-value:1e-18
log p-value:-4.248e+01
Information Content per bp:1.747
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets97.4 +/- 55.3bp
Average Position of motif in Background115.3 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCGGRT----
NAGANTGGCGGGGNGNA

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCCGGRT---
-RCCGGAARYN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCCGGRT---
-DCCGGAARYN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCCGGRT---
-RCCGGAAGTD

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCGGRT-
CWGGCGGGAA

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGGRT
ACTTCCGGNT

PB0011.1_Ehf_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCCGGRT---
TNACTTCCGGNTNNN

MA0028.1_ELK1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCGGRT-
GAGCCGGAAG

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCCGGRT-----
NTNTGGGGGGTCNNNA

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCGGRT---
NNNNATGCGGGTNNNN