Information for motif43


Reverse Opposite:

p-value:1e-15
log p-value:-3.552e+01
Information Content per bp:1.530
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets79.0 +/- 65.1bp
Average Position of motif in Background79.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGAGCTTCTG
---GCTTCC-

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTCTG-----
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTCTG-----
TNNTGCTACTGTNNNN

MA0160.1_NR4A2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTCTG
GTGACCTT---

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAGCTTCTG--
TGACCTTGANNN

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAGCTTCTG
NTGACCTTGA-

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCTTCTG--
NNNGTGACCTTTGNNN

MA0164.1_Nr2e3/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAGCTTCTG
CAAGCTT---

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGAGCTTCTG
--ANCAGCTG

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCTTCTG--
NNNNTGACCTTTNNNN