Information for motif44


Reverse Opposite:

p-value:1e-15
log p-value:-3.502e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets90.2 +/- 52.4bp
Average Position of motif in Background85.0 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:ACAGCTGTTC
ACAGCTGTTV

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ACAGCTGTTC
-CAGCTGTT-

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:ACAGCTGTTC
ACAGCTGTTN

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCTGTTC---
CNGACACCTGTTCNNN

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:ACAGCTGTTC
HCAGCTGDTN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ACAGCTGTTC-
AGCAGCTGCTNN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ACAGCTGTTC
NCAGCTGCTG

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCTGTTC
NNGCAGCTGTT-

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-ACAGCTGTTC--
TGCAGCTGTCCCT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ACAGCTGTTC
GCAGCTGTNN