Information for motif49


Reverse Opposite:

p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.957
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets102.1 +/- 51.8bp
Average Position of motif in Background93.4 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGACGGCG----
----GGCGCGCT

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGACGGCG--------
CCTTCGGCGCCAAAAGG

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGACGGCG--
GGGGGCGGGGCC

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGACGGCG--------
AGCTCGGCGCCAAAAGC

MA0018.2_CREB1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGACGGCG
TGACGTCA

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGACGGCG-------
NAGANTGGCGGGGNGNA

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGACGGCG----
NATNGGGNGGGGANAN

PB0131.1_Gmeb1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGACGGCG----
TNAACGACGTCGNCCA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGACGGCG
GGGGGGGG

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGACGGCG-----
NNNAAGGGGGCGGGNNN