Information for motif51


Reverse Opposite:

p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets113.3 +/- 50.0bp
Average Position of motif in Background81.2 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTCG----
GGAAAAATTGTTAGGAA

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AATTGTCG----
AAAATTGTTATGAA

MA0078.1_Sox17/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AATTGTCG
CTCATTGTC-

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---AATTGTCG-----
GNNATTTGTCGTAANN

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AATTGTCG-----
AATCAATTGTTCCGCTA

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AATTGTCG-
CCATTGTTNY

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATTGTCG
-ATTGTT-

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATTGTCG-----
TTCAATTGTTCTAAAA

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTCG---
ANNTCCATTGTTCNNN

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AATTGTCG-----
CNNNTATTGTTCNNNNN