Information for motif9


Reverse Opposite:

p-value:1e-38
log p-value:-8.836e+01
Information Content per bp:1.695
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets85.6 +/- 54.9bp
Average Position of motif in Background48.3 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGCCCTAGACCT
TGACCTTGACCT

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTAGACCT---
GAGCCCTTGTCCCTAA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGCCCTAGACCT
----CNAGGCCT

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCCCTAGACCT
AGGCCTAG----

MA0146.2_Zfx/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTAGACCT-
GGGGCCGAGGCCTG

MA0505.1_Nr5a2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCTAGACCT-
GCTGACCTTGAACTN

MA0524.1_TFAP2C/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCCCTAGACCT
CATGGCCCCAGGGCA

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTAGACCT-
CCGCCCAAGGGCAG

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCCCTAGACCT------
--NNNNTGACCTTTNNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTAGACCT
CAGCC--------