Information for motif33


Reverse Opposite:

p-value:1e-14
log p-value:-3.271e+01
Information Content per bp:1.946
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets106.9 +/- 60.4bp
Average Position of motif in Background113.4 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:WGCATATG--
AACAKATGGY

MA0058.2_MAX/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-WGCATATG-
AAGCACATGG

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-WGCATATG--
AAGGATATNTN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---WGCATATG
ATTTGCATAT-

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--WGCATATG--
VNAVCAGCTGGC

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-WGCATATG-
AAGCACATGG

MA0464.1_Bhlhe40/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-WGCATATG--
NTGCACGTGAG

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---WGCATATG
ATTTGCATAA-

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:WGCATATG----
AACAGATGGTCN

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------WGCATATG---
AAAATATGCATAATAAA