p-value: | 1e-6 |
log p-value: | -1.524e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 0.97% |
Number of Background Sequences with motif | 8.4 |
Percentage of Background Sequences with motif | 0.25% |
Average Position of motif in Targets | 97.0 +/- 65.4bp |
Average Position of motif in Background | 119.9 +/- 55.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 1 |
Score: | 0.83 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTAGCAA---- TACCATAGCAACGGT |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.82 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTAGCAA--- SCCTAGCAACAG |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 3 |
Score: | 0.82 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTAGCAA---- CCGCATAGCAACGGA |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 4 |
Score: | 0.82 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CCTAGCAA-------- TGTGACCCTTAGCAACCGATTAA |
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MA0510.1_RFX5/Jaspar
Match Rank: | 5 |
Score: | 0.78 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTAGCAA---- CTCCCTGGCAACAGC |
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MA0509.1_Rfx1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTAGCAA- GTTGCCATGGCAAC |
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MA0600.1_RFX2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTAGCAA------ GTTGCCATGGCAACCGCGG |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTAGCAA CTTGGCAA |
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MA0463.1_Bcl6/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTAGCAA--- TTTCCTAGAAAGCA |
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PB0006.1_Bcl6b_1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CCTAGCAA-- NNNATTCCTCGAAAGN |
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