Information for motif38


Reverse Opposite:

p-value:1e-17
log p-value:-4.126e+01
Information Content per bp:1.833
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets79.0 +/- 53.6bp
Average Position of motif in Background76.8 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAAGCGA----
GAAAGTGAAAGT

MA0051.1_IRF2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCGA---------
GGAAAGCGAAACCAAAAC

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCGA------
AGAAAGTGAAAGTGA

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAAGCGA
CACAGN--

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCGA---
CGGAAGTGAAAC

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCGA
ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAAAGCGA
AAAGATCAAAGGAA

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAAGCGA
NGAAGC--

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CAAAGCGA--
NNNAGATCAAAGGANNN

MA0067.1_Pax2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAAGCGA--
--NCGTGACN