Information for motif13


Reverse Opposite:

p-value:1e-29
log p-value:-6.838e+01
Information Content per bp:1.568
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets95.9 +/- 56.8bp
Average Position of motif in Background125.1 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAAGATATTACC--
GACAGAGATATCAGTGT

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAGATATTACC-
GCAAAACATTACTA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAAGATATTACC
AAGGATATNTN-

POL005.1_DPE/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAGATATTACC
GAAGATGTT---

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAAGATATTACC----
NNNNNBAGATAWYATCTVHN

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAAGATATTACC
CAAATCCAGACATCACA

PB0125.1_Gata3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAAGATATTACC------
TTTTGTAGATTTTATCGACTTA

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAGATATTACC-
-ATGACGTCATCN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAAGATATTACC
NACAGGAAAT----

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGATATTACC
CAGGAAAT----