Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
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1 |  | CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.607e+01 | 0.0000 | 109.0 | 7.35% | 48.9 | 4.41% | motif file (matrix) |
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2 |  | FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -1.130e+01 | 0.0015 | 18.0 | 1.21% | 4.3 | 0.39% | motif file (matrix) |
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3 |  | HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.034e+01 | 0.0027 | 22.0 | 1.48% | 6.4 | 0.58% | motif file (matrix) |
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4 |  | CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer | 1e-3 | -8.956e+00 | 0.0079 | 46.0 | 3.10% | 19.9 | 1.79% | motif file (matrix) |
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5 |  | Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -8.813e+00 | 0.0079 | 142.0 | 9.58% | 78.1 | 7.04% | motif file (matrix) |
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6 |  | PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-3 | -8.607e+00 | 0.0079 | 40.0 | 2.70% | 16.9 | 1.52% | motif file (matrix) |
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7 |  | Sp1(Zf)/Promoter/Homer | 1e-3 | -7.663e+00 | 0.0165 | 7.0 | 0.47% | 1.4 | 0.12% | motif file (matrix) |
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8 |  | CHR/Cell-Cycle-Exp/Homer | 1e-3 | -7.185e+00 | 0.0233 | 125.0 | 8.43% | 70.6 | 6.36% | motif file (matrix) |
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9 |  | Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer | 1e-2 | -6.669e+00 | 0.0347 | 14.0 | 0.94% | 4.1 | 0.37% | motif file (matrix) |
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10 |  | Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.647e+00 | 0.0347 | 54.0 | 3.64% | 26.3 | 2.37% | motif file (matrix) |
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11 |  | Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer | 1e-2 | -6.579e+00 | 0.0347 | 75.0 | 5.06% | 39.9 | 3.60% | motif file (matrix) |
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12 |  | Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -6.566e+00 | 0.0347 | 97.0 | 6.55% | 53.1 | 4.78% | motif file (matrix) |
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13 |  | RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -6.512e+00 | 0.0347 | 16.0 | 1.08% | 6.0 | 0.54% | motif file (matrix) |
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14 |  | HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -6.245e+00 | 0.0347 | 93.0 | 6.28% | 51.6 | 4.65% | motif file (matrix) |
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15 |  | bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -6.110e+00 | 0.0364 | 77.0 | 5.20% | 41.6 | 3.75% | motif file (matrix) |
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16 |  | NRF1/Promoter/Homer | 1e-2 | -5.976e+00 | 0.0390 | 6.0 | 0.40% | 0.9 | 0.08% | motif file (matrix) |
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17 |  | Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-2 | -5.765e+00 | 0.0454 | 407.0 | 27.46% | 270.4 | 24.38% | motif file (matrix) |
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18 |  | Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.643e+00 | 0.0484 | 19.0 | 1.28% | 7.8 | 0.71% | motif file (matrix) |
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19 |  | Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer | 1e-2 | -5.636e+00 | 0.0484 | 105.0 | 7.09% | 60.5 | 5.46% | motif file (matrix) |
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20 |  | BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer | 1e-2 | -5.597e+00 | 0.0484 | 224.0 | 15.11% | 141.6 | 12.77% | motif file (matrix) |
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21 |  | Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer | 1e-2 | -5.534e+00 | 0.0484 | 50.0 | 3.37% | 25.8 | 2.33% | motif file (matrix) |
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22 |  | AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -4.806e+00 | 0.0914 | 216.0 | 14.57% | 138.7 | 12.51% | motif file (matrix) |
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23 |  | AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.686e+00 | 0.0987 | 572.0 | 38.60% | 395.7 | 35.68% | motif file (matrix) |
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24 |  | Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.660e+00 | 0.0987 | 35.0 | 2.36% | 17.2 | 1.56% | motif file (matrix) |
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25 |  | Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.660e+00 | 0.0987 | 35.0 | 2.36% | 17.8 | 1.61% | motif file (matrix) |
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