Information for motif28


Reverse Opposite:

p-value:1e-83
log p-value:-1.922e+02
Information Content per bp:1.530
Number of Target Sequences with motif315.0
Percentage of Target Sequences with motif16.24%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif4.85%
Average Position of motif in Targets102.4 +/- 56.5bp
Average Position of motif in Background80.0 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGGCTCTA---
-AGGTCTCTAACC

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGAGGCTCTA
---NGCTN--

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTCTA------
CTAAGGTTCTAGATCAC

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGCTCTA
TTGAGTGSTT---

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGAGGCTCTA------
-AGNGTTCTAATGANN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGCTCTA
CTTGAGTGGCT---

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------AGAGGCTCTA
AAATTCAAGTGGNTTN-

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------AGAGGCTCTA
AATTTCAAGTGGCTTN-

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTCTA------
AGGACGCTGTAAAGGGA

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------AGAGGCTCTA
AATNTTAAGTGGNTNN-