Information for motif13


Reverse Opposite:

p-value:1e-18
log p-value:-4.248e+01
Information Content per bp:1.627
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.8 +/- 62.8bp
Average Position of motif in Background76.7 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCGTACGTTCC----
NTGACTCANTTTTTCCANTN

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTCGTACGTTCC----
----CACATTCCTCCG

MA0081.1_SPIB/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CTCGTACGTTCC---
--------TTCCTCT

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCGTACGTTCC
----TACGTGCV

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTCGTACGTTCC---
-----RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTCGTACGTTCC---
-----GCATTCCAGN

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCGTACGTTCC----
CCTTCCTTCCTTCCTTCC

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCGTACGTTCC-----
----TTACTTCCTNGTN

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCGTACGTTCC
----TACTNNNN

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTCGTACGTTCC---
-------CTTCCGGT