Information for motif2


Reverse Opposite:

p-value:1e-22
log p-value:-5.121e+01
Information Content per bp:1.764
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets101.4 +/- 52.0bp
Average Position of motif in Background42.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTCAGAGAGGA----
WNAGTCADAVTGAAACTN

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTCAGAGAGGA--
AAACAGACAAAGGAAT

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACTCAGAGAGGA----
--GGAGAAAGGTGCGA

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACTCAGAGAGGA
NNNACCGAGAGTNNN

MA0081.1_SPIB/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ACTCAGAGAGGA-
------AGAGGAA

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTCAGAGAGGA--
CAAATCCAGACATCACA

MA0143.3_Sox2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACTCAGAGAGGA
---AACAAAGG-

MA0099.2_JUN::FOS/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACTCAGAGAGGA
TGACTCA-------

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ACTCAGAGAGGA
----ACAAAG--

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACTCAGAGAGGA
GNNACCGAGAATNNN