Information for motif25


Reverse Opposite:

p-value:1e-14
log p-value:-3.396e+01
Information Content per bp:1.848
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets90.3 +/- 56.5bp
Average Position of motif in Background93.3 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAACCCGCC----
NAGCCCCGCCCCCN

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAACCCGCC------
TACGCCCCGCCACTCTG

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAACCCGCC-----
TCGACCCCGCCCCTAT

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------AGAACCCGCC
TATCATTAGAACGCT--

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAACCCGCC---
NNNNGGTACCCCCCANN

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAACCCGCC------
ANNTNCCCACCCANNAC

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAACCCGCC-----
TCGTACCCGCATCATT

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAACCCGCC----
TATCGACCCCCCACAG

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AGAACCCGCC
NNGATCTAGAACCTNNN

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGAACCCGCC-
-GGTCCCGCCC