Information for motif32


Reverse Opposite:

p-value:1e-21
log p-value:-4.888e+01
Information Content per bp:1.474
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets99.0 +/- 55.6bp
Average Position of motif in Background78.9 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTATATABAG
CCATATATGG

MA0052.2_MEF2A/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CTATATABAG---
AGCTAAAAATAGCAT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTATATABAG
CCAAAAATAG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTATATABAG-
DCYAAAAATAGM

MA0033.1_FOXL1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTATATABAG
-TATACATA-

MA0497.1_MEF2C/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTATATABAG--
ATGCTAAAAATAGAA

MA0108.2_TBP/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTATATABAG
NNNNNNCTTTTATAN

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTATATABAG
NNNNNNCTTTTATAN

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTATATABAG--
CCTTTTATAGNC

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTATATABAG---
TCTTTATATATAAATA