Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
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1 |  | NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-98 | -2.279e+02 | 0.0000 | 179.0 | 9.23% | 1.8 | 2.05% | motif file (matrix) |
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2 |  | STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-44 | -1.024e+02 | 0.0000 | 115.0 | 5.93% | 1.2 | 1.29% | motif file (matrix) |
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3 |  | STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer | 1e-42 | -9.896e+01 | 0.0000 | 113.0 | 5.82% | 1.2 | 1.29% | motif file (matrix) |
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4 |  | Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-35 | -8.127e+01 | 0.0000 | 148.0 | 7.63% | 2.8 | 3.15% | motif file (matrix) |
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5 |  | MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-32 | -7.499e+01 | 0.0000 | 143.0 | 7.37% | 2.1 | 2.40% | motif file (matrix) |
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6 |  | TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-29 | -6.890e+01 | 0.0000 | 138.0 | 7.11% | 2.3 | 2.64% | motif file (matrix) |
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7 |  | CHR/Cell-Cycle-Exp/Homer | 1e-28 | -6.652e+01 | 0.0000 | 136.0 | 7.01% | 2.7 | 3.08% | motif file (matrix) |
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8 |  | FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-28 | -6.567e+01 | 0.0000 | 92.0 | 4.74% | 0.7 | 0.84% | motif file (matrix) |
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9 |  | Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-27 | -6.301e+01 | 0.0000 | 133.0 | 6.86% | 2.8 | 3.15% | motif file (matrix) |
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10 |  | CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-27 | -6.275e+01 | 0.0000 | 90.0 | 4.64% | 1.1 | 1.28% | motif file (matrix) |
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11 |  | Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer | 1e-26 | -5.987e+01 | 0.0000 | 88.0 | 4.54% | 1.1 | 1.27% | motif file (matrix) |
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12 |  | ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-24 | -5.751e+01 | 0.0000 | 199.0 | 10.26% | 4.7 | 5.32% | motif file (matrix) |
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13 |  | Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-22 | -5.288e+01 | 0.0000 | 83.0 | 4.28% | 1.7 | 1.96% | motif file (matrix) |
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14 |  | MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-21 | -5.043e+01 | 0.0000 | 340.0 | 17.53% | 9.8 | 11.05% | motif file (matrix) |
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15 |  | Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-18 | -4.336e+01 | 0.0000 | 213.0 | 10.98% | 5.1 | 5.69% | motif file (matrix) |
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16 |  | AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-17 | -3.949e+01 | 0.0000 | 294.0 | 15.15% | 8.4 | 9.47% | motif file (matrix) |
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17 |  | Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.762e+01 | 0.0000 | 109.0 | 5.62% | 2.0 | 2.27% | motif file (matrix) |
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18 |  | EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-16 | -3.751e+01 | 0.0000 | 234.0 | 12.06% | 6.3 | 7.15% | motif file (matrix) |
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19 |  | Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-15 | -3.668e+01 | 0.0000 | 108.0 | 5.57% | 2.9 | 3.22% | motif file (matrix) |
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20 |  | Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-15 | -3.517e+01 | 0.0000 | 445.0 | 22.94% | 14.3 | 16.08% | motif file (matrix) |
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21 |  | ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-14 | -3.300e+01 | 0.0000 | 137.0 | 7.06% | 3.9 | 4.35% | motif file (matrix) |
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22 |  | Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.268e+01 | 0.0000 | 67.0 | 3.45% | 0.0 | 0.00% | motif file (matrix) |
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23 |  | Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-13 | -3.033e+01 | 0.0000 | 101.0 | 5.21% | 2.3 | 2.61% | motif file (matrix) |
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24 |  | BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer | 1e-12 | -2.806e+01 | 0.0000 | 273.0 | 14.07% | 8.2 | 9.20% | motif file (matrix) |
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25 |  | Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.502e+01 | 0.0000 | 60.0 | 3.09% | 0.9 | 1.03% | motif file (matrix) |
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26 |  | USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-10 | -2.399e+01 | 0.0000 | 59.0 | 3.04% | 1.1 | 1.28% | motif file (matrix) |
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27 |  | HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-9 | -2.297e+01 | 0.0000 | 58.0 | 2.99% | 1.4 | 1.61% | motif file (matrix) |
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28 |  | GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-9 | -2.274e+01 | 0.0000 | 314.0 | 16.19% | 10.1 | 11.31% | motif file (matrix) |
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29 |  | CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer | 1e-9 | -2.198e+01 | 0.0000 | 57.0 | 2.94% | 1.7 | 1.94% | motif file (matrix) |
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30 |  | Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-9 | -2.100e+01 | 0.0000 | 284.0 | 14.64% | 9.1 | 10.19% | motif file (matrix) |
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31 |  | GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-9 | -2.090e+01 | 0.0000 | 149.0 | 7.68% | 4.9 | 5.56% | motif file (matrix) |
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32 |  | Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-8 | -2.067e+01 | 0.0000 | 204.0 | 10.52% | 6.7 | 7.59% | motif file (matrix) |
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33 |  | c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer | 1e-8 | -2.004e+01 | 0.0000 | 55.0 | 2.84% | 1.1 | 1.28% | motif file (matrix) |
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34 |  | ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-8 | -2.004e+01 | 0.0000 | 55.0 | 2.84% | 1.8 | 2.07% | motif file (matrix) |
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35 |  | NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.817e+01 | 0.0000 | 53.0 | 2.73% | 1.6 | 1.81% | motif file (matrix) |
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36 |  | HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-7 | -1.727e+01 | 0.0000 | 52.0 | 2.68% | 0.0 | 0.00% | motif file (matrix) |
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37 |  | c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.727e+01 | 0.0000 | 52.0 | 2.68% | 1.4 | 1.54% | motif file (matrix) |
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38 |  | Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.727e+01 | 0.0000 | 52.0 | 2.68% | 0.0 | 0.00% | motif file (matrix) |
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39 |  | TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer | 1e-7 | -1.727e+01 | 0.0000 | 52.0 | 2.68% | 0.9 | 1.04% | motif file (matrix) |
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40 |  | Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-7 | -1.687e+01 | 0.0000 | 248.0 | 12.78% | 8.8 | 9.95% | motif file (matrix) |
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41 |  | Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.548e+01 | 0.0000 | 166.0 | 8.56% | 5.0 | 5.65% | motif file (matrix) |
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42 |  | NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.526e+01 | 0.0000 | 344.0 | 17.73% | 12.8 | 14.40% | motif file (matrix) |
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43 |  | ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-6 | -1.386e+01 | 0.0000 | 240.0 | 12.37% | 8.8 | 9.93% | motif file (matrix) |
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44 |  | Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-5 | -1.226e+01 | 0.0000 | 132.0 | 6.80% | 4.8 | 5.39% | motif file (matrix) |
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45 |  | HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer | 1e-5 | -1.225e+01 | 0.0000 | 46.0 | 2.37% | 0.0 | 0.00% | motif file (matrix) |
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46 |  | PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.166e+01 | 0.0000 | 157.0 | 8.09% | 5.9 | 6.59% | motif file (matrix) |
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47 |  | bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.074e+01 | 0.0001 | 44.0 | 2.27% | 0.5 | 0.58% | motif file (matrix) |
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48 |  | Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -1.074e+01 | 0.0001 | 44.0 | 2.27% | 1.2 | 1.32% | motif file (matrix) |
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49 |  | Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.074e+01 | 0.0001 | 44.0 | 2.27% | 0.0 | 0.00% | motif file (matrix) |
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50 |  | Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-4 | -1.001e+01 | 0.0002 | 43.0 | 2.22% | 0.6 | 0.68% | motif file (matrix) |
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51 |  | TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.985e+00 | 0.0002 | 100.0 | 5.15% | 3.3 | 3.69% | motif file (matrix) |
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52 |  | IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer | 1e-4 | -9.769e+00 | 0.0003 | 72.0 | 3.71% | 2.9 | 3.24% | motif file (matrix) |
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53 |  | Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-4 | -9.342e+00 | 0.0004 | 125.0 | 6.44% | 4.5 | 5.04% | motif file (matrix) |
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54 |  | Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -9.274e+00 | 0.0004 | 418.0 | 21.55% | 16.9 | 19.00% | motif file (matrix) |
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55 |  | Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-3 | -8.724e+00 | 0.0007 | 555.0 | 28.61% | 22.8 | 25.71% | motif file (matrix) |
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56 |  | GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.636e+00 | 0.0008 | 41.0 | 2.11% | 0.8 | 0.95% | motif file (matrix) |
pdf |
57 |  | MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.636e+00 | 0.0008 | 41.0 | 2.11% | 1.8 | 2.04% | motif file (matrix) |
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58 |  | EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.251e+00 | 0.0011 | 96.0 | 4.95% | 3.3 | 3.73% | motif file (matrix) |
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59 |  | Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.238e+00 | 0.0011 | 69.0 | 3.56% | 2.9 | 3.22% | motif file (matrix) |
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60 |  | MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-3 | -8.001e+00 | 0.0014 | 172.0 | 8.87% | 6.8 | 7.61% | motif file (matrix) |
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61 |  | Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -7.968e+00 | 0.0014 | 574.0 | 29.59% | 23.7 | 26.70% | motif file (matrix) |
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62 |  | HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -7.445e+00 | 0.0023 | 94.0 | 4.85% | 4.0 | 4.47% | motif file (matrix) |
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63 |  | AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.098e+00 | 0.0032 | 728.0 | 37.53% | 30.8 | 34.68% | motif file (matrix) |
pdf |
64 |  | Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer | 1e-3 | -7.051e+00 | 0.0033 | 384.0 | 19.79% | 15.4 | 17.29% | motif file (matrix) |
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65 |  | Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-2 | -6.679e+00 | 0.0048 | 288.0 | 14.85% | 11.7 | 13.22% | motif file (matrix) |
pdf |
66 |  | EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.162e+00 | 0.0079 | 37.0 | 1.91% | 0.0 | 0.00% | motif file (matrix) |
pdf |
67 |  | Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.553e+00 | 0.0142 | 114.0 | 5.88% | 4.8 | 5.40% | motif file (matrix) |
pdf |
68 |  | n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.973e+00 | 0.0251 | 112.0 | 5.77% | 4.3 | 4.85% | motif file (matrix) |
pdf |
69 |  | NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.785e+00 | 0.0298 | 160.0 | 8.25% | 6.1 | 6.86% | motif file (matrix) |
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