Information for motif53


Reverse Opposite:

p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.959
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets109.2 +/- 52.8bp
Average Position of motif in Background92.7 +/- 68.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGTC-----
GAGCCCTTGTCCCTAA

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCCTTGTC--
NCCTTATCTG

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCCTTGTC--
NNCTTATCTN

MA0035.3_Gata1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCCTTGTC---
TTCTTATCTGT

MA0442.1_SOX10/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCCTTGTC
-CTTTGT-

MA0109.1_Hltf/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCCTTGTC-
AACCTTATAT

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGTC------
NTNTTCTTATCAGTNTN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCCTTGTC---
-YCTTATCWVN

MA0036.2_GATA2/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGTC---
AGATTCTTATCTGT

MA0078.1_Sox17/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCTTGTC
CTCATTGTC