Information for motif16


Reverse Opposite:

p-value:1e-28
log p-value:-6.585e+01
Information Content per bp:1.820
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets83.6 +/- 49.8bp
Average Position of motif in Background88.5 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGYTAC---
ACTTGCTACCTACACC

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGYTAC---
ACATGCTACCTAATAC

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCTAGYTAC---
TACCCTAGTTACCGA

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGYTAC----
GAAAACTAGTTAACATC

PH0081.1_Pdx1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGYTAC---
NTGNGCTAATTACCNN

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCTAGYTAC-----
ANNNCTAGTTAACNGNN

PH0045.1_Hoxa1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGYTAC---
CTGAGCTAATTACCGT

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGYTAC---
NTGAGCTAATTACCNT

PH0060.1_Hoxb5/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGYTAC---
ATGNGCTAATTANCNT

PH0052.1_Hoxa5/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGYTAC---
NTGAGCTAATTACCNT