p-value: | 1e-24 |
log p-value: | -5.551e+01 |
Information Content per bp: | 1.725 |
Number of Target Sequences with motif | 33.0 |
Percentage of Target Sequences with motif | 2.23% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.25% |
Average Position of motif in Targets | 101.4 +/- 40.0bp |
Average Position of motif in Background | 94.0 +/- 5.7bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT -RACAAWGG--- |
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MA0143.3_Sox2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT -AACAAAGG--- |
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Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT- ---TAATTGATTA |
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MA0442.1_SOX10/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT --ACAAAG---- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTACAATGGATT- AATGAACAATGGAATT |
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MA0077.1_SOX9/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT GAACAATGG--- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT GAACAATGGN-- |
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MA0078.1_Sox17/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACAATGGATT -GACAATGNN-- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTACAATGGATT RNAACAATGG--- |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTACAATGGATT- TNNAGAACAATANATNN |
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