Information for motif11


Reverse Opposite:

p-value:1e-136
log p-value:-3.146e+02
Information Content per bp:1.530
Number of Target Sequences with motif344.0
Percentage of Target Sequences with motif17.73%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif4.17%
Average Position of motif in Targets99.0 +/- 53.6bp
Average Position of motif in Background109.6 +/- 48.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGAAGCCTT
-NGAAGC---

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGAAGCCTT
---AAGCTTG

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGAAGCCTT--
NNGGCCACGCCTTTN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGAAGCCTT
ACTGAAACCA-

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTGAAGCCTT-
---AGGCCTNG

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGAAGCCTT---
TGTCGTGACCCCTTAAT

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGAAGCCTT
---CAGCC--

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTGAAGCCTT---
NNNNTTGACCCCTNNNN

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTGAAGCCTT----
NTTGTTAATCCCTCTNN

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGAAGCCTT
-TGACGTCA-