Information for motif15


Reverse Opposite:

p-value:1e-124
log p-value:-2.866e+02
Information Content per bp:1.530
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif10.57%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets101.1 +/- 53.1bp
Average Position of motif in Background113.6 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TTAGGCCT
CNAGGCCT

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TTAGGCCT
CTAGGCCT

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TTAGGCCT-
GGGGCCGAGGCCTG

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGCCT
AATTAG----

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTAGGCCT------
CAAAGGCGTGGCCAG

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGCCT-----
TNNATTATGCATANNTT

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGCCT
BCMATTAG----

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGCCT---
ANNTTTTACGACNTNN

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGCCT---
NNNTTTTACGACNTTN

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGCCT---
NNGTTTTACGACTTTA