Information for motif48


Reverse Opposite:

p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.860
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets97.5 +/- 56.0bp
Average Position of motif in Background36.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0057.1_MZF1_5-13/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTCMA
TTCCCCCTAC-

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCTCMA
NNGGCCACGCCTTTN

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCTCMA
GCCCCGCCCCC-

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCTCMA---
GCCCCGCCCCCTCCC

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CGCCTCMA
NAGCCCCGCCCCCN

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGCCTCMA
AGCGCGCC----

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGCCTCMA----
GGTCCCGCCCCCTTCTC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTCMA
TGACACCT---

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCCTCMA---
ATCCCCGCCCCTAAAA

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCCTCMA
-GCTTCC-