Information for motif51


Reverse Opposite:

p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets108.5 +/- 58.4bp
Average Position of motif in Background131.7 +/- 49.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGAAGTAC------
ACTCCAAGTACTTGGAA

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGAAGTAC-------
TACTAAGTACTTAAATG

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGAAGTAC
NGAAGC--

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGAAGTAC-------
TTTTAAGTACTTAAATT

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAAGTAC
-TAAGTAT

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTAC
GGTAAGTA-

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGTAC------
CNTTAAGTACTTAANG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AGAAGTAC
TTAAGAGGAAGTTA

MA0109.1_Hltf/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGTAC
NNATAAGGNN

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGAAGTAC
ACVAGGAAGT--