Information for motif17


Reverse Opposite:

p-value:1e-28
log p-value:-6.585e+01
Information Content per bp:1.605
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets101.0 +/- 58.9bp
Average Position of motif in Background106.7 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGAAGAGAGAAA
CGGAAGTGAAAC-

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGAAGAGAGAAA--
--GAAAGTGAAAGT

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAAGAGAGAAA----
-AGAAAGTGAAAGTGA

MA0051.1_IRF2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGAAGAGAGAAA-------
-GGAAAGCGAAACCAAAAC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGAAGAGAGAAA--
--GAAAGTGAAAGT

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GGAAGAGAGAAA
NNNNGGGGGAAGANGG---

MA0080.3_Spi1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAAGAGAGAAA----
-AAAAAGAGGAAGTGA

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAAGAGAGAAA------
GGAAGGAAGGAAGGAAGG

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAAGAGAGAAA---
WNAGTCADAVTGAAACTN

MA0050.2_IRF1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAAGAGAGAAA------
AAANNGAAAGTGAAAGTAAAN