Information for motif1


Reverse Opposite:

p-value:1e-41
log p-value:-9.520e+01
Information Content per bp:1.797
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets87.3 +/- 47.0bp
Average Position of motif in Background80.0 +/- 46.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GGTACTCTCA-
ACTCCAAGTACTTGGAA

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTACTCTCA-----
AGTATTCTCGGTTGC

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTACTCTCA-----
NNAATTCTCGNTNAN

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTACTCTCA
--TACTNNNN

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTACTCTCA-----
ACCACTCTCGGTCAC

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGTACTCTCA--
-AGCCACTCAAG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGTACTCTCA-
-AASCACTCAA

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTACTCTCA-----
---ACTTTCACTTTC

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGTACTCTCA---
NNNNGGTACCCCCCANN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTACTCTCA
CNGTCCTCCC-