Information for motif18


Reverse Opposite:

p-value:1e-114
log p-value:-2.636e+02
Information Content per bp:1.530
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif10.05%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets105.7 +/- 54.7bp
Average Position of motif in Background105.3 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGCTGCT
-NGCTN--

MA0048.1_NHLH1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGCTGCT----
NCGCAGCTGCGN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCGCTGCT-----
AATCGCACTGCATTCCG

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGCT------
NCCGTTGCTANGNGN

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCTGCT
--GCTTCC

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCGCTGCT
--GCTGTG

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCTGCT
NNGCNCTGCGCGGC-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGCTGCT-
-ANCAGCTG

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGCT------
NNCGTTGCTATGGNN

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGCT------
AAGACGCTGTAAAGCGA