Information for motif19


Reverse Opposite:

p-value:1e-113
log p-value:-2.613e+02
Information Content per bp:1.530
Number of Target Sequences with motif194.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets103.0 +/- 52.5bp
Average Position of motif in Background140.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAGAT-
GTTAAAAAAAAAAATTA

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAGAT
AACAAACAACAAGAG

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAGAT
TACTGGAAAAAAAA---

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAGAT-
GTTCAAAAAAAAAATTC

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAGAT
AGCCGAAAAAAAAAT--

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AAAAAAAAAGAT--
--AAACAAACATTC

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAGAT-----
NNTAAAAACGATGTTNT

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAAAAAAAGAT--
--AAACAAACANNC

MA0514.1_Sox3/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAGAT
AAAACAAAGG--

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAGAT
ATATCAAAACAAAACA-