Information for motif2


Reverse Opposite:

p-value:1e-250
log p-value:-5.777e+02
Information Content per bp:1.524
Number of Target Sequences with motif405.0
Percentage of Target Sequences with motif20.88%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif2.87%
Average Position of motif in Targets99.2 +/- 55.9bp
Average Position of motif in Background64.1 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0154.2_EBF1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TWCYCTGG----
-TCCCTGGGGAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TWCYCTGG----
TCCCCTGGGGAC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TWCYCTGG---
-GGTCTGGCAT

MA0524.1_TFAP2C/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TWCYCTGG-------
TGCCCTGGGGCNANN

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TWCYCTGG-
---GCTGTG

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TWCYCTGG------
CAATCACTGGCAGAAT

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TWCYCTGG-----
NNTNNTGTCTGGNNTNG

MA0161.1_NFIC/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TWCYCTGG--
----TTGGCA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TWCYCTGG-------
TTTCCTGGAAAGNNN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TWCYCTGG
CTGTCTGG