Information for motif20


Reverse Opposite:

p-value:1e-108
log p-value:-2.498e+02
Information Content per bp:1.530
Number of Target Sequences with motif354.0
Percentage of Target Sequences with motif18.25%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif5.38%
Average Position of motif in Targets101.0 +/- 53.4bp
Average Position of motif in Background59.5 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TAATGAATGA
NNTNTCATGAATGT

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAATGAATGA-----
ACTATGAATGAATGAT

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAATGAATGA----
AGTTATTAATGAGGTC

PH0142.1_Pou1f1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TAATGAATGA---
GANTTAATTAATTANNN

PH0146.1_Pou3f1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TAATGAATGA---
NANTTAATTAATTANNN

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAATGAATGA
TAATCAATTA

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TAATGAATGA---
NNNTATTGAATTGNNN

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAATGA---
TGTAATTAATTATGG

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TAATGAATGA--
CNAGTTAATTAATAANN

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAATGAATGA----
AATTAATTAATTAATTC