Information for motif21


Reverse Opposite:

p-value:1e-102
log p-value:-2.364e+02
Information Content per bp:1.530
Number of Target Sequences with motif503.0
Percentage of Target Sequences with motif25.93%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif10.03%
Average Position of motif in Targets100.3 +/- 53.7bp
Average Position of motif in Background105.2 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTTCATCCT-----
GATAACATCCTAGTAG

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTCATCCT
NTTATTCGTCATNC-

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCTTCATCCT-
--TACTTCCTT

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTTCATCCT
GCTTCC----

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCATCCT-----
NTTGTTAATCCCTCTNN

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCATCCT-----
NNNATTAATCCGNTTNA

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTTCATCCT----
GNNNATTAATCCCTNCN

MA0080.3_Spi1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCATCCT---
NCACTTCCTCTTTTN

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTTCATCCT
-GCTAATCC-

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTCATCCT--
ACCACATCCTGT