Information for motif23


Reverse Opposite:

p-value:1e-89
log p-value:-2.071e+02
Information Content per bp:1.530
Number of Target Sequences with motif367.0
Percentage of Target Sequences with motif18.92%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif6.53%
Average Position of motif in Targets103.7 +/- 57.3bp
Average Position of motif in Background135.7 +/- 46.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0151.1_ARID3A/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CAGGTTTGAT
----TTTAAT

MA0103.2_ZEB1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAGGTTTGAT
CAGGTGAGG-

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGTTTGAT-
-AGGTGTGAAM

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTTTGAT
NNCAGGTGNN--

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTTTGAT------
NNNNNATTGATGNGTGN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGTTTGAT--
--CCTTTGATGT

MA0009.1_T/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGTTTGAT
CTAGGTGTGAA

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGGTTTGAT----
GAAAAGGTGTGAAAATT

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGGTTTGAT-----
ATTTCCTTTGATCTATA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGTTTGAT
-AGGTGTCA-