Information for motif31


Reverse Opposite:

p-value:1e-74
log p-value:-1.722e+02
Information Content per bp:1.530
Number of Target Sequences with motif414.0
Percentage of Target Sequences with motif21.34%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif7.90%
Average Position of motif in Targets103.7 +/- 55.6bp
Average Position of motif in Background88.1 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCAAGCCAGA--
--ATGCCAGACN

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAAGCCAGA-------
CAAATCCAGACATCACA

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCAAGCCAGA
---TGCCAA-

MA0002.2_RUNX1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCAAGCCAGA---
--AAACCACAGAN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCAAGCCAGA-----
-----CCAGACRSVB

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAAGCCAGA------
-CAAACCACAAACCCC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCAAGCCAGA---
-----CCAGACAG

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAAGCCAGA
TCCAATCCACA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAAGCCAGA--
--AAACCACANN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCAAGCCAGA--------
-AAGGCCAGATGGTCCGG