Information for motif38


Reverse Opposite:

p-value:1e-31
log p-value:-7.166e+01
Information Content per bp:1.975
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets107.2 +/- 57.1bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0035.3_Gata1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTCTTCTCTGT
-TTCTTATCTGT

MA0482.1_Gata4/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTCTTCTCTGT-
--TCTTATCTCCC

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTCTTCTCTGT
--TCTTATCT--

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCTTCTCTGT-----
NNTNANTTCTTATCTCTANANN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTCTTCTCTGT
-NCCTTATCTG-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTCTTCTCTGT
-NNCTTATCTN-

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTCTTCTCTGT
AGATTCTTATCTGT

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTTCTCTGT---
NTNTTCTTATCAGTNTN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTCTTCTCTGT
--YCTTATCWVN

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCTTCTCTGT---
AGTATTCTCGGTTGC