Information for motif39


Reverse Opposite:

p-value:1e-23
log p-value:-5.425e+01
Information Content per bp:1.703
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets95.0 +/- 56.8bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCATCTGCTTG
--CAGCTGNT--

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCATCTGCTTG
GCCATCTGTT--

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCATCTGCTTG-
TTCATTTGCATAT

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTCATCTGCTTG--
--CAGCTGTTTCCT

MA0058.2_MAX/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCATCTGCTTG
-CCATGTGCTT-

MA0522.1_Tcf3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCATCTGCTTG
CACAGCTGCAG-

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCATCTGCTTG
NNGCAGCTGTC--

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCATCTGCTTG
NNGCAGCTGTT--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCATCTGCTTG
-HCAGCTGDTN-

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCATCTGCTTG
--CAGCTGTT--