Information for motif4


Reverse Opposite:

p-value:1e-172
log p-value:-3.981e+02
Information Content per bp:1.530
Number of Target Sequences with motif327.0
Percentage of Target Sequences with motif16.86%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets104.3 +/- 55.5bp
Average Position of motif in Background81.2 +/- 82.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CCACCAGGCC-
---CTAGGCCT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CCACCAGGCC-
---CNAGGCCT

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCACCAGGCC-
CATGGCCCCAGGGCA

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCACCAGGCC--------
----CAGGCCNNGGCCNN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCACCAGGCC
ATTTCCCAGVAKSCY

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCACCAGGCC
NNCACCTGNN-

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACCAGGCC
ATCCAC------

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CCACCAGGCC
CATAAGACCACCATTAC

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCACCAGGCC
--AGCGCGCC

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCACCAGGCC--
SCCTSAGGSCAW