Information for motif43


Reverse Opposite:

p-value:1e-13
log p-value:-3.121e+01
Information Content per bp:1.960
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets94.3 +/- 55.6bp
Average Position of motif in Background63.0 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AAACAACAACAA--
CAAACAACAACACCT

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---AAACAACAACAA
AACAAACAACAAGAG

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAACAACAACAA
ATGTCACAACAACAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AAACAACAACAA
ATATCAAAACAAAACA--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAACAACAACAA
AAACCACANN--

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAACAACAACAA----
-AAAAATAACAAACGG

MA0511.1_RUNX2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAACAACAACAA--
CAAACCACAAACCCC

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAACAACAACAA
AAACCACAGC--

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAACAACAACAA
NAAACCACAG---

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAACAACAACAA
NTTNAGAACAATTA