Information for motif8


Reverse Opposite:

p-value:1e-151
log p-value:-3.493e+02
Information Content per bp:1.530
Number of Target Sequences with motif304.0
Percentage of Target Sequences with motif15.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets95.7 +/- 55.1bp
Average Position of motif in Background96.8 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCCAAGGG--
NTCAAGGTCA

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TCCAAGGG---
NANAGATCAAAGGGNNN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCCAAGGG
ACWTCAAAGG-

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCAAGGG--
BTCAAGGTCA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCCAAGGG-
ACATCAAAGGNA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCCAAGGG
ACATCAAAGG-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TCCAAGGG---
NNNAGATCAAAGGANNN

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCCAAGGG----
-CCAAGGTCACA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCAAGGG--
GTCCCCAGGGGA

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCCAAGGG-
AAAGATCAAAGGAA