Information for motif13


Reverse Opposite:

p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.659
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif9.89%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets69.9 +/- 49.0bp
Average Position of motif in Background95.6 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0482.1_Gata4/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAWSAGRCA
NNGAGATAAGA--

MA0462.1_BATF::JUN/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGAGAWSAGRCA
-GAAATGACTCA

MA0491.1_JUND/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGAGAWSAGRCA--
---NATGAGTCACN

MA0037.2_GATA3/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGAWSAGRCA
--AGATAAGA--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAGAWSAGRCA
-CAGATAAGGN-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAGAWSAGRCA
-NAGATAAGNN-

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAGAWSAGRCA-
AGGAGATGACTCAT

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAGAWSAGRCA-
---GATGAGTCAT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGAGAWSAGRCA
NBWGATAAGR--

MA0476.1_FOS/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAGAWSAGRCA--
---NATGAGTCANN