Information for motif16


Reverse Opposite:

p-value:1e-5
log p-value:-1.336e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.49%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets94.6 +/- 52.1bp
Average Position of motif in Background94.7 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CATGGGTAGGTG
--TGCGTGGGYG

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATGGGTAGGTG---
GTATTGGGTGGGTAATT

Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATGGGTAGGTG-
GTCATGCHTGRCTGS

MA0009.1_T/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CATGGGTAGGTG----
-----CTAGGTGTGAA

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATGGGTAGGTG----
-GTGCGTGGGCGGGNG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CATGGGTAGGTG---
-------AGGTGTCA

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CATGGGTAGGTG--
--NGCGTGGGCGGR

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATGGGTAGGTG-
---GGGTACGTGC

PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CATGGGTAGGTG-
NGTCACGCTTGGCTGC

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CATGGGTAGGTG-------
---GCGGAGGTGTCGCCTC