Information for motif18


Reverse Opposite:

p-value:1e-3
log p-value:-9.179e+00
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets125.0 +/- 17.5bp
Average Position of motif in Background101.8 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGSTGWGGGAG
GGGGNGGGGC--

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGSTGWGGGAG----
-GTGCGTGGGCGGGNG

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGSTGWGGGAG
TGGGTGTGGC--

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGSTGWGGGAG
TGGGTGGGGC--

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGSTGWGGGAG
NTGGGTGTGGCC-

MA0493.1_Klf1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGSTGWGGGAG
TGGGTGTGGCN-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGSTGWGGGAG
DGGGYGKGGC--

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGSTGWGGGAG--
--NGCGTGGGCGGR

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGSTGWGGGAG
NNGTGNGGGCGGGAG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGSTGWGGGAG
--TGCGTGGGYG