Information for motif5


Reverse Opposite:

p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets99.3 +/- 49.9bp
Average Position of motif in Background85.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGGCACT
TGGGTGTGGC---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GTGTGGCACT
NTGGGTGTGGCC--

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGCACT-
TGTCTGDCACCT

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGGCACT
TGGGTGTGGCN--

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGCACT
NATGTTGCAA-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGTGGCACT
DGGGYGKGGC---

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTGTGGCACT--
TGCGGAGTGGGACTGG

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGTGGCACT
TGGGTGGGGC---

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGGCACT--
NGTAGGTTGGCATNNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGCACT
GGTCTGGCAT-