Information for motif7


Reverse Opposite:

p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif9.89%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets100.7 +/- 58.4bp
Average Position of motif in Background85.0 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCTTTTACA---
-CCTTTTATAGNC

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCTTTTACA
CAAGCTT-----

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCTTTTACA
---TTTTCCA

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTTTTACA
CAGCC------

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTTTACA
CAGCTGTT---

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCTTTTACA
ACAGCTGTTV--

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCTTTTACA-
NNNNNNCTTTTATAN

MA0108.2_TBP/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCTTTTACA-
NNNNNNCTTTTATAN

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCTTTTACA-------
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCTTTTACA-------
TCNNTTTACAGCGNNNT