Information for motif15


Reverse Opposite:

p-value:1e-30
log p-value:-7.069e+01
Information Content per bp:1.812
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets113.3 +/- 51.4bp
Average Position of motif in Background138.6 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACCTTTATTA-
-NTTTTATGAC

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACCTTTATTA-----
NAATTTTATTACCNNN

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTATTA----
TNAATTTTATTACCTN

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACCTTTATTA-------
--CCGTATTATAAACAA

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACCTTTATTA-----
-TCTTTANTAATANN

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACCTTTATTA--
--TTTTATTRGN

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACCTTTATTA-----
NAATTTTATTACCTNN

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACCTTTATTA----
NTNAATTTTATTGNATT

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACCTTTATTA-----
NCNTTTGTTATTTNN

MA0465.1_CDX2/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACCTTTATTA---
--TTTTATGGCTN