Information for motif22


Reverse Opposite:

p-value:1e-27
log p-value:-6.329e+01
Information Content per bp:1.718
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets91.5 +/- 56.5bp
Average Position of motif in Background148.4 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGCTTCTAA----
TTCTAGAANNTTCCAGAANN

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGAAGCTTCTAA--
TAGAANVTTCTAGAA

MA0164.1_Nr2e3/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGAAGCTTCTAA
--AAGCTTG---

MA0486.1_HSF1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAAGCTTCTAA---
AGAANNTTCTAGAAN

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAAGCTTCTAA---
AGATGCTRCTRCCHT

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAGCTTCTAA-----
--AGNGTTCTAATGANN

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAAGCTTCTAA
NGAAGC------

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGCTTCTAA-
NNNNAGCAGCTGCTGAN

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAAGCTTCTAA----
ACATGCTACCTAATAC

CHR/Cell-Cycle-Exp/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGAAGCTTCTAA
--CGGTTTCAAA