Information for motif23


Reverse Opposite:

p-value:1e-27
log p-value:-6.220e+01
Information Content per bp:1.754
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif4.45%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets101.0 +/- 57.2bp
Average Position of motif in Background82.6 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTTCTTTAA-
NNNNTTTTTTTTTNAAC

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTCTTTAA-
NTNTTGTTGTTTGTN

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTTCTTTAA
NNTTTTTCTTATNT--

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTTCTTTAA--
GNATTTTTTTTTTGANC

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTCTTCTTTAA---
NAGTTTCABTHTGACTNW

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTTCTTTAA
NCNTTTGTTATTTNN

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTCTTCTTTAA--
-TTAATGTTTAACC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTCTTTAA
TTTTTTTTCNNGTN

PH0153.1_Prop1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTTCTTTAA----
GNNTNTTAATTAATNCN

PH0091.1_Lhx1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTTCTTTAA----
NNTTATTAATTAATNCN