Information for motif24


Reverse Opposite:

p-value:1e-26
log p-value:-6.067e+01
Information Content per bp:1.844
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets93.0 +/- 59.5bp
Average Position of motif in Background102.3 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0081.1_SPIB/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGCCTCTAT
-TTCCTCT--

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCTCTAT----
GGNGCGNCTGTTNNN

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------GTGCCTCTAT
NNNNTTGTGTGCTTNN--

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGCCTCTAT
NNACTTGCCTT---

MA0080.3_Spi1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTGCCTCTAT--
NCACTTCCTCTTTTN

MA0143.3_Sox2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTGCCTCTAT-
---CCTTTGTT

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTGCCTCTAT---
---CCTTTGTTTT

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------GTGCCTCTAT
NNGCGTGTGTGCNGCN--

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTGCCTCTAT--
GGGTGTGCCCAAAAGG

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTGCCTCTAT
CACTTCCTCT--