Information for motif31


Reverse Opposite:

p-value:1e-23
log p-value:-5.297e+01
Information Content per bp:1.666
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets111.6 +/- 53.4bp
Average Position of motif in Background99.8 +/- 43.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---WGAGATTAATTT--
TAGAGGGATTAAATTTC

MA0135.1_Lhx3/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:WGAGATTAATTT---
--AAATTAATTAATC

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---WGAGATTAATTT--
NANAGGGATTAATTATN

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---WGAGATTAATTT--
AGAGGGGATTAATTTAT

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.72
Offset:4
Orientation:forward strand
Alignment:WGAGATTAATTT
----AATAATT-

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---WGAGATTAATTT--
TGTAGGGATTAATTGTC

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---WGAGATTAATTT--
TGAAGGGATTAATCATC

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:WGAGATTAATTT-----
GAAAATTAATTACTTCG

MA0075.1_Prrx2/Jaspar

Match Rank:9
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:WGAGATTAATTT
------TAATT-

PH0172.1_Tlx2/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-WGAGATTAATTT----
AANTTATTAATTAATTA