| p-value: | 1e-21 |
| log p-value: | -5.047e+01 |
| Information Content per bp: | 1.388 |
| Number of Target Sequences with motif | 31.0 |
| Percentage of Target Sequences with motif | 2.09% |
| Number of Background Sequences with motif | 2.8 |
| Percentage of Background Sequences with motif | 0.25% |
| Average Position of motif in Targets | 80.1 +/- 48.3bp |
| Average Position of motif in Background | 112.1 +/- 51.6bp |
| Strand Bias (log2 ratio + to - strand density) | -0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0040.1_Hmbox1/Jaspar
| Match Rank: | 1 |
| Score: | 0.61
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----BCACTAGTCY--
GANGTTAACTAGTTTNN |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 2 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | BCACTAGTCY
TCATCAATCA |
|
|
|
POL002.1_INR/Jaspar
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | BCACTAGTCY
TCAGTCTT-- |
|
|
|
MA0158.1_HOXA5/Jaspar
| Match Rank: | 4 |
| Score: | 0.58
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | BCACTAGTCY
-CACTAATT- |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 5 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --BCACTAGTCY
RGCCATYAATCA |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 6 |
| Score: | 0.57
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | BCACTAGTCY--
----TWGTCTGV |
|
|
|
PH0025.1_Dmbx1/Jaspar
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -BCACTAGTCY------
NNNATTAATCCGNTTNA |
|
|
|
PH0035.1_Gsc/Jaspar
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --BCACTAGTCY-----
AATCGTTAATCCCTTTA |
|
|
|
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -BCACTAGTCY----
NNAATTAGTCACGGT |
|
|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | BCACTAGTCY
--GCTAATCC |
|
|
|
