Information for motif35


Reverse Opposite:

p-value:1e-20
log p-value:-4.799e+01
Information Content per bp:1.450
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets111.6 +/- 53.9bp
Average Position of motif in Background123.9 +/- 43.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGGATC
CTTGAGTGGCT-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGGATC
TTGAGTGSTT-

PB0125.1_Gata3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGAGGATC-------
NNNNNCGATANNATCTNNNNAN

MA0498.1_Meis1/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGAGAGGATC
NNNTGAGTGACAGCT--

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGAGAGGATC----
NNNNNBAGATAWYATCTVHN

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGAGAGGATC
--AGAGGAA-

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGAGAGGATC
GGTGYTGACAGS---

PH0014.1_Cphx/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGGATC--
NTTGATTNNATCAN

MA0467.1_Crx/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGAGGATC--
-AAGAGGATTAG

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGAGAGGATC-
-GGGAGGACNG