| p-value: | 1e-17 |
| log p-value: | -4.126e+01 |
| Information Content per bp: | 1.885 |
| Number of Target Sequences with motif | 32.0 |
| Percentage of Target Sequences with motif | 2.16% |
| Number of Background Sequences with motif | 4.0 |
| Percentage of Background Sequences with motif | 0.36% |
| Average Position of motif in Targets | 92.6 +/- 51.5bp |
| Average Position of motif in Background | 75.4 +/- 55.8bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.71
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----ATGTCTAA-----
NNTNNTGTCTGGNNTNG |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 2 |
| Score: | 0.69
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ATGTCTAA
TWGTCTGV |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.66
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ATGTCTAA
CTGTCTGG |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 4 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATGTCTAA
VBSYGTCTGG |
|
|
|
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ATGTCTAA--
AGGTGTGAAM |
|
|
|
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATGTCTAA----
ACCGTGACTAATTNN |
|
|
|
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | ATGTCTAA-----
-TGTCTGDCACCT |
|
|
|
MA0462.1_BATF::JUN/Jaspar
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATGTCTAA
GAAATGACTCA |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ATGTCTAA-----
CTGTCTGTCACCT |
|
|
|
PH0086.1_Irx5/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -7
| | Orientation: | forward strand |
| Alignment: | -------ATGTCTAA--
AATATACATGTAAAATT |
|
|
|
