Information for motif4


Reverse Opposite:

p-value:1e-43
log p-value:-1.005e+02
Information Content per bp:1.884
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets92.6 +/- 52.9bp
Average Position of motif in Background132.5 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATATGAGATGTT
ACCCGTATCAAATTT-

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATATGAGATGTT---
TATTATGGGATGGATAA

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATATGAGATGTT----
NNTATTACATGTANNNT

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATATGAGATGTT--
--AACAGATGGTCN

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATATGAGATGTT----
ANTATTACATGTANNNN

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATATGAGATGTT----
NNTTTTACATGTANNNT

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATATGAGATGTT----
ANTNNTACATGTANNTN

MA0037.2_GATA3/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATATGAGATGTT
AGATAAGA----

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATATGAGATGTT----
AAGGCCAGATGGTCCGG

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------ATATGAGATGTT
NNTNNCAATATTAG-----