Information for motif40


Reverse Opposite:

p-value:1e-17
log p-value:-4.078e+01
Information Content per bp:1.653
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets117.6 +/- 51.8bp
Average Position of motif in Background79.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAGACCTTC
CNAGGCCT--

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAGACCTTC
CTAGGCCT--

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTAGACCTTC-
-NTGACCTTGA

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTAGACCTTC----
NNNNATGACCTTGANTN

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTAGACCTTC----
--TGACCTTGANNN

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTAGACCTTC----
NNNNTGACCTTTNNNN

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTAGACCTTC-
-----GCTTCC

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGACCTTC--
NNGATCTAGAACCTNNN

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTAGACCTTC--
--TGACCTTGAN

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAGACCTTC
-GTGACCTT-