Information for motif41


Reverse Opposite:

p-value:1e-17
log p-value:-4.078e+01
Information Content per bp:1.760
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets109.7 +/- 60.4bp
Average Position of motif in Background135.4 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGTYYCGA----
TNTGGTTTCGATACN

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGTYYCGA----
NNNTTGGTTTCGNTNNN

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGTYYCGA-----
NTGGTTTCGGTTNNN

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTYYCGA---
AGGTCTCTAACC

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTYYCGA-----
TNAGTTTCGATTTTN

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTYYCGA--
GGTCCCGCCC

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGTYYCGA----
NNTNNTGTCTGGNNTNG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTYYCGA
CTGTCTGG-

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGTYYCGA-
TGGTTTCAGT

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGTYYCGA-----
CAGTTTCGNTTCTN