Information for motif44


Reverse Opposite:

p-value:1e-16
log p-value:-3.786e+01
Information Content per bp:1.875
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets86.6 +/- 53.7bp
Average Position of motif in Background105.3 +/- 64.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0109.1_Hltf/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAYACGGT-
NNATAAGGNN

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAYACGGT
GNCTATAAAAGG-

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAYACGGT
TNCCATATATGG-

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAYACGGT-
TTCCATATATGGAA

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAYACGGT------
---CAGGTAAGTAT

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAYACGGT-------
TATTCAAGGTCATGCGA

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAYACGGT------
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TAYACGGT------
NNANTAACGGTTNNNAN

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAYACGGT
TACTNNNN

MA0083.2_SRF/Jaspar

Match Rank:10
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------TAYACGGT--
CATGCCCAAATAAGGCAA