Information for motif46


Reverse Opposite:

p-value:1e-14
log p-value:-3.390e+01
Information Content per bp:1.530
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets99.1 +/- 57.5bp
Average Position of motif in Background74.6 +/- 77.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACATATTAGCC
NNTNNCAATATTAG--

PH0034.1_Gbx2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACATATTAGCC---
AGCGCTAATTAGCGATT

MA0132.1_Pdx1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACATATTAGCC
----AATTAG--

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACATATTAGCC---
ACCCCTAATTAGCGGTG

PH0027.1_Emx2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACATATTAGCC--
NNCCACTAATTAGNNNT

PH0156.1_Rax/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACATATTAGCC---
TGCACTAATTAGCGCAC

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACATATTAGCC--
GAAGACCAATTAGCGCT

PH0097.1_Lhx6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACATATTAGCC---
TCCACTAATTAGCGGTT

PH0032.1_Evx2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACATATTAGCC---
ANCGCTAATTAGCGGTN

PH0033.1_Gbx1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACATATTAGCC---
TNCACTAATTAGTNNNN