Information for motif47


Reverse Opposite:

p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets99.2 +/- 56.9bp
Average Position of motif in Background92.1 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGTAA----
NNNACCTCATTATCNTN

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCAGTAA
GGTAAGTA-

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGTAA----
GCAACCTCATTATNNNN

PH0150.1_Pou4f3/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGTAA-----
GACNTCATTAATAANN

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTCAGTAA-----
ATGGTTCAATAATTTTG

MA0124.1_NKX3-1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCAGTAA
-TAAGTAT

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCAGTAA---
CTGAGTCAGCAATTT

MA0099.2_JUN::FOS/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCAGTAA
-TGAGTCA

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCAGTAA-----
GCTGAGTCAGCAATTTTT

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCAGTAA-
-YCATTAMC