Information for motif50


Reverse Opposite:

p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets113.9 +/- 57.3bp
Average Position of motif in Background53.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:CAAGATGACGTG
-----TGACGT-

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAAGATGACGTG
---CATGAC---

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGATGACGTG
CAAGATGGCGGC

PB0038.1_Jundm2_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAAGATGACGTG-----
-NCGATGACGTCATCGN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAAGATGACGTG-
---GATGACGTCA

MA0095.2_YY1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAGATGACGTG
CAAGATGGCGGC

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAAGATGACGTG--
--NGATGACGTCAT

MA0018.2_CREB1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAAGATGACGTG-
-----TGACGTCA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAAGATGACGTG
--AGAGGAAGTG

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAGATGACGTG-----
-ACGATGACGTCATCGA