Information for motif8


Reverse Opposite:

p-value:1e-38
log p-value:-8.810e+01
Information Content per bp:1.720
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets89.8 +/- 57.0bp
Average Position of motif in Background87.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AATCAGTTCTGT
TAATCAATTA---

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AATCAGTTCTGT
TGTCGGTT----

PH0028.1_En1/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AATCAGTTCTGT
GNATTAATTAGTTNNC-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AATCAGTTCTGT
AAATCACTGC---

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AATCAGTTCTGT
NNNTTAATTGGTTTTN-

POL002.1_INR/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AATCAGTTCTGT
--TCAGTCTT--

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AATCAGTTCTGT
TAAACTAATTAGCTTTG-

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATCAGTTCTGT
CAAATCACTG----

MA0060.2_NFYA/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AATCAGTTCTGT
TGGACCAATCAGCACTCT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AATCAGTTCTGT
GTTTCACTTCCG-