Information for motif9


Reverse Opposite:

p-value:1e-37
log p-value:-8.698e+01
Information Content per bp:1.728
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets103.1 +/- 50.9bp
Average Position of motif in Background178.2 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0042.1_FOXI1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACAGAAATATCC
AAACAAACANNC

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACAGAAATATCC
DCYAAAAATAGM-

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGAAATATCC----
GACAGAGATATCAGTGT

MA0497.1_MEF2C/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACAGAAATATCC
ATGCTAAAAATAGAA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACAGAAATATCC--
---AAGATATCCTT

MA0052.2_MEF2A/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACAGAAATATCC-
AGCTAAAAATAGCAT

PB0163.1_Six6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGAAATATCC----
ATGGGATATATCCGCCT

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACAGAAATATCC
AAATAAACA---

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACAGAAATATCC
AAACAAACATTC

MA0158.1_HOXA5/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACAGAAATATCC
-CACTAATT---