Information for motif1


Reverse Opposite:

p-value:1e-27
log p-value:-6.311e+01
Information Content per bp:1.502
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets103.8 +/- 52.3bp
Average Position of motif in Background105.1 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CHCTTCCCTDGC
-HTTTCCCASG-

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CHCTTCCCTDGC
CACTTCCTCT--

MA0080.3_Spi1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CHCTTCCCTDGC--
NCACTTCCTCTTTTN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CHCTTCCCTDGC
GTTTCACTTCCG----

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CHCTTCCCTDGC
CCCCCCCC----

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CHCTTCCCTDGC----
----TCCCNNGGGACN

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CHCTTCCCTDGC---
----TCCCTGGGGAN

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CHCTTCCCTDGC
GCCCCGCCCC---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CHCTTCCCTDGC
----TCCCCA--

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CHCTTCCCTDGC-
NNACTTCCTCTTNN