Information for motif13


Reverse Opposite:

p-value:1e-22
log p-value:-5.140e+01
Information Content per bp:1.452
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets118.2 +/- 54.0bp
Average Position of motif in Background40.5 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCTAT
CTAGGCCT--

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGCCTAT
GGGGCCGAGGCCTG-

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCTAT
CNAGGCCT--

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCCTAT----
NNNTNGGGCGTATNNTN

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGGCCTAT
GCTGTG-----

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGCCTAT-
TGCCCTGGGGCNANN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCTAT
CTGTTCCTGG

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGCCTAT
ATGCCCGGGCATGT

MA0002.2_RUNX1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGGGCCTAT
GTCTGTGGTTT-

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------CTGGGCCTAT
NNTCCTGCTGTGNNN--