Information for motif15


Reverse Opposite:

p-value:1e-22
log p-value:-5.140e+01
Information Content per bp:1.702
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets88.1 +/- 57.4bp
Average Position of motif in Background143.0 +/- 47.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACGCGAT
CACGCA--

MA0527.1_ZBTB33/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AACGCGAT--
NAGNTCTCGCGAGAN

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AACGCGAT-----
NNTAAAAACGATGTTNT

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AACGCGAT
TBGCACGCAA-

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AACGCGAT----
NNNACCGAGAGTNNN

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AACGCGAT--
GTGCCACGCGACTG

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AACGCGAT---
GGNTCTCGCGAGAAC

GFX(?)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACGCGAT---
TCTCGCGAGAAT

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AACGCGAT
ATCACCCCAT

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AACGCGAT
ACCACGTGAC