Information for motif16


Reverse Opposite:

p-value:1e-19
log p-value:-4.577e+01
Information Content per bp:1.703
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets88.0 +/- 58.2bp
Average Position of motif in Background89.0 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTACCTCAAA
--ACGTCA--

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTACCTCAAA--
--ACWTCAAAGG

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTACCTCAAA--
--ACATCAAAGG

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTACCTCAAA----
--ACATCAAAGGNA

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTACCTCAAA--
NNNNGGTACCCCCCANN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTACCTCAAA-
NWAACCACADNN

Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTACCTCAAA-------
GAAGTANCACGAATNMRAGT

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTACCTCAAA------
TATAGATCAAAGGAAAA

MA0523.1_TCF7L2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTACCTCAAA----
AAAGATCAAAGGAA

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTACCTCAAA-----
TCACCCATCAATAAACA