Information for motif17


Reverse Opposite:

p-value:1e-19
log p-value:-4.577e+01
Information Content per bp:1.441
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets111.3 +/- 52.4bp
Average Position of motif in Background124.8 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTACCAAGGGGC-
-TCCCCTGGGGAC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTACCAAGGGGC-
-TCCCNNGGGACN

MA0154.2_EBF1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTACCAAGGGGC
GTCCCCAGGGA-

MA0155.1_INSM1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTACCAAGGGGC-
-TGTCAGGGGGCG

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTACCAAGGGGC
--AACAAAGG--

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTACCAAGGGGC-------
GCCASCAGGGGGCGCYVNNG

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTACCAAGGGGC
-TGCCAA-----

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTACCAAGGGGC
TTGCCAAG----

MA0116.1_Zfp423/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTACCAAGGGGC--
GGCACCCAGGGGTGC

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTACCAAGGGGC
--RACAAWGG--